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2025, 01, v.39 12-18
基于RT-RPA和试纸条的烟草环斑病毒可视化快速检测技术研究
基金项目(Foundation): 国家重点研发计划项目(2022YFC2601500;2022YFC2601503); 三亚崖州湾科技城管理局资助项目(SYND-2021-03)
邮箱(Email): fanzf@cau.edu.cn;
DOI: 10.19662/j.cnki.issn1005-2755.2025.01.003
摘要:

烟草环斑病毒(tobacco ringspot virus,TRSV)分布于50多个国家,是我国进境植物检疫性病毒。该病毒的寄主范围广,可侵染54科300多种植物;通过机械方式、嫁接、线虫媒介以及种子传播,对作物产量和品质时常造成严重损失。本研究选择了TRSV的外壳蛋白基因序列设计引物,建立了基于反转录(reverse transcription,RT)-重组酶聚合酶扩增(recombinase polymerase amplification,RPA)和侧流层析试纸条(lateral flow dipstick,LFD)的RT-RPA-LFD检测方法,灵敏度为486 pg/μL。验证结果表明本研究所设计的RPA引物特异性强,操作简便,适用于田间或口岸现场,利于TRSV的监测与暴发流行的早期预警。

Abstract:

Tobacco ringspot virus(TRSV) is prevalent in over 50 countries worldwide,and has been categorized as a plant quarantine pest in China. TRSV has a wide host range,infecting over 300 plant species in 54 families. TRSV spreads through mechanical means,grafting,nematodes and seeds,posing a significant risk of epidemics that could severely impact crop yield and quality. A detection system combining reverse transcription(RT), recombinase polymerase amplification(RPA) and lateral flow dipstick(LFD),has been established using primers based on the coat protein gene sequence. This method exhibited a sensitivity of 486 pg/μL,and specificity validation demonstrated that the RPA primers designed in this study are highly specific. The method is simple to perform,thus suitable for on-site or field detection of TRSV.This approach could be of significant importance for the monitoring and early prediction of TRSV occurrence and outbreaks.

参考文献

[1] Fang L,Wei X Y,Liu L Z,et al. A tobacco ringspot virus-based vector system for gene and microRNA function studies in cucurbits. Plant Physiology,2021,186(2):853-864.

[2] Fromme F D,Wingard S A,Priode C N. Ringspot of tobacco;an infectious disease of unknown cause. Phytopathology,1927,17(5):321-328.

[3] Hill J H,Whitham S A. Control of virus diseases in soybeans. Adv Virus Res,2014,90:355-390.

[4] Harrison B D,MurantA F. Nepoviruses:ecology and control//Harrison B D,MurantA F. The plant viruses:polyhedral virions and bipartite RNA genomes. Boston,MA:Springer,1996:211-228.

[5] Golnaraghi A R,Shahraeen N,Pourrahim R,et al. Occurrence and relative incidence of viruses infecting soybeans in Iran.Plant Dis,2004,88(10):1069-1074.

[6] Li J L,Cornman R S,Evans J D,et al. Systemic spread and propagation of a plant-pathogenic virus in European honeybees,Apis mellifera. mBio,2014,5(1):e00898-13.

[7] EFSA Panel on Plant Health(EFSA PLH Panel),Bragard C,Dehnen-Schmutz K. Pest categorisation of non-EU viruses and viroids of Vitis L. EFSA Journal,2019,17(9):e05669.

[8] Taylor C E,Robertson W M. Acquisition,retention and transmission of viruses by nematodes//Lamberti F,Taylor C E,Seinhorst J W. Nematode vectors of plant viruses. Boston,MA:Springer,1975:253-276.

[9] Murant A F,Jones A T,Martelli G P,et al. Nepoviruses:general properties,diseases,and virus identification//Harrison B D,Murant A F. The plant viruses:polyhedral virions and bipartite RNA genomes. Boston,MA:Springer,1996:99-137.

[10] Martin R R,Polashock J J,Tzanetakis I E. New and emerging viruses of blueberry and cranberry. Viruses,2012,4(11):2831-2852.

[11] Chandrasekar V,Johnson J E. The structure of tobacco ringspot virus:a link in the evolution of icosahedral capsids in the picornavirus superfamily. Structure,1998,6(2):157-171.

[12] Brown D J F,Ploeg A T,Trudgill D L. The transmission of viruses by soil nematodes. Developments in Agricultural and Managed Forest Ecology,1991,23:57-66.

[13] Singh S,Awasthi L P,Jangre A,et al. Transmission of plant viruses through soil-inhabiting nematode vectors//Awasthi L P.Applied Plant Virology. Amsterdam:Elsevier,2020:291-300.

[14] Brown D. Viruses transmitted by nematodes 1. EPPO Bulletin,1989,19(3):453-461.

[15] Demski J W,Harris H B. Seed transmission of viruses in soybean 1. Crop Science,1974,14(6):888-890.

[16] Yang A F,Hamilton R I. The mechanism of seed transmission of tobacco ringspot virus in soybean. Virology,1974,62(1):26-37.

[17] Bandara A Y,Weerasooriya D K,Bradley C A,et al. Dissecting the economic impact of soybean diseases in the United States over two decades. PLoS One,2020,15(4):141.

[18] Romaine C P,Newhart S R,Anzola D. Enzyme-linked immunosorbent assay for plant viruses in intact leaf tissue disks.Phytopathology,1981,71(3):308-312.

[19]李桂芬,魏梅生,马洁,等.烟草环斑病毒抗体及DAS-ELISA试剂盒的研制.检验检疫学刊,2015,25(4):1-4.

[20]吴兴海,陈长法,张云霞,等.应用复合RT-PCR同时检测烟草环斑病毒和番茄环斑病毒.江苏农业学报,2006(4):398-400.

[21]张永江,李明福,黄冲,等.一步法RT-PCR检测烟草环斑病毒试剂盒的研制与应用.安徽农业科学,2006(10):2072-2073.

[22]杨翠云,曹洁,于翠,等.烟草环斑病毒的RT-PCR和IC-RT-PCR检测方法研究.上海农业学报,2007(1):83-87.

[23]郇晓雪,刘晓宇,房乐,等.烟草环斑病毒RT-PCR检测体系的优化.山东农业科学,2021,53(6):98-102.

[24]魏霜,袁俊杰,杨卓瑜,等.双重DPO-RT-PCR检测南方菜豆花叶病毒及烟草环斑病毒.大豆科学,2021,40(2):265-269.

[25]易汪雪,宋绍祎,吴东妮,等.单管多重RT-PCR同时检测大豆种子中三种检疫性植物病毒.植物保护,2016,42(5):113-117.

[26] Lee J,Cho W,Choi H,et al. RT-PCR detection of five quarantine plant RNA viruses belonging to Poty-and Tospoviruses.Plant Pathology Journal,2011,27(3):291-296.

[27] Lee S,Lee G,Choi I C,et al. Development of PCR diagnostic system for detection of the seed-transmitted tobacco ringspot virus in quarantine. Indian Journal of Microbiology,2015,55:231-233.

[28]李孝军,殷汉华,陈宇,等. 4种大豆种传病毒多重RT-PCR检测.植物检疫,2011,25(6):33-36.

[29]杨伟东,郑耘,陈枝楠,等.烟草环斑病毒RT-Realtime PCR检测方法.植物保护学报,2007(2):157-160.

[30]郑耘,杨伟东,陈枝楠,等.烟草环斑病毒DB-RT-Realtime PCR检测方法研究.植物保护,2007(1):117-120.

[31]黄海泉.实时荧光定量PCR技术在植物检疫中应用的研究进展.湖北农业科学,2012,51(1):5-8.

[32]杨翠云,于翠,张舒亚,等.利用实时荧光RT-PCR方法检测番茄环斑病毒和烟草环斑病毒.植物检疫,2006(S1):31-34.

[33]易汪雪,陈舜胜,杨翠云,等.单管实时荧光RT-PCR方法同时检测大豆种子中的菜豆荚斑驳病毒和烟草环斑病毒.植物病理学报,2011,41(1):85-92.

[34]黄江华,陈秀菊,彭仁,等.烟草环斑病毒研究进展.现代农业科学,2008(1):24-27.

[35]魏梅生,李桂芬,马洁,等.烟草环斑病毒磁免疫层析试纸条的研制.植物检疫,2014,28(2):24-27.

[36]曹成,魏梅生,张永江,等.双重胶体金层析法快速检测番茄环斑病毒和烟草环斑病毒RT-PCR扩增子.中国农学通报,2011,27(22):197-201.

[37]杨翠云,魏梅生,于翠,等.胶体金免疫层析试纸结合RT-PCR法快速检测烟草环斑病毒.上海交通大学学报(农业科学版),2008,1(3):208-211.

[38] Tan M,Liao C,Liang L,et al. Recent advances in recombinase polymerase amplification:Principle,advantages,disadvantages and applications. Frontiers in Cellular and Infection Microbiology,2022,12:1019071.

[39] Li J,Macdonald J,Von Stetten F. A comprehensive summary of a decade development of the recombinase polymerase amplification. Analyst,2019,144(1):31-67.

[40] Anfossi L,Baggiani C,Giovannoli C,et al. Lateral-flow immunoassays for mycotoxins and phycotoxins:a review. Analytical and Bioanalytical Chemistry,2013,405:467-480.

[41] Wu H,Zhao P,Yang X,et al. A recombinase polymerase amplification and lateral flow strip combined method that detects Salmonella enterica serotype typhimurium with no worry of primer-dependent artifacts. Frontiers in Microbiology,2020,11:1015.

[42] Gao D,Guo X,Yang Y,et al. Microfluidic chip and isothermal amplification technologies for the detection of pathogenic nucleic acid. Journal of Biological Engineering,2022,16(1):33.

[43] Choi J,Osatuke A C,Erich G,et al. High-throughput sequencing reveals tobacco and tomato ringspot viruses in pawpaw.Plants,2022,11(24):3565.

基本信息:

DOI:10.19662/j.cnki.issn1005-2755.2025.01.003

中图分类号:S41-30

引用信息:

[1]韩春雪,徐司琦,王欣宇等.基于RT-RPA和试纸条的烟草环斑病毒可视化快速检测技术研究[J].植物检疫,2025,39(01):12-18.DOI:10.19662/j.cnki.issn1005-2755.2025.01.003.

基金信息:

国家重点研发计划项目(2022YFC2601500;2022YFC2601503); 三亚崖州湾科技城管理局资助项目(SYND-2021-03)

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